If you don't mind a few marks on the barrel, a bench vise and a large crescent wrench will do the trick. It will mark-up the receiver and the barrel, but if you can live with the blemishes......
If all you want to do is get the index a bit closer to TDC, there is no real need to spin off the barrel and clean the threads. It would be a pretty good idea to do so tho!
Over index is sometimes easier to fix than under, it kinda depends on how much out of index it is too. When its over indexed sometimes all that is required is to give the action half a spin off and then re-tighten it. As long as you have a minimum of 15 degrees of to torque the barrel, after its hand tight, it will be torqued enough to stay in place. I you have less than 15 degrees, then you have some work to do! If you have more than 30 degrees after its hand tight, then something is outta whack, or out of spec.
There is a "flat" spot just rear of the rear sight, it isn't generally perfectly plumb with the rear sight deck, but it should be pretty close. Remove the front sight use the base as another reference location. Use a couple sections of the cleaning rod and balance them on those 2 locations. That should give you a pretty good idea how bad it actually is. A bit of tape or a small rubber type pinch clamp to hold them in place while you work or so you can get a good look from the front or back of the barrelled action.
Once the barrel is indexed, you'll likely have to reset your op-rod guide location.
When I do a re-index, I completely strip every single part off the receiver and barrel. I tear it completely down, toss it all in the parts washer over night and then assemble it correctly. It never seems to work that way at the clinics, and they seem to turn out just fine!
John